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HADDOCK structure of TgMIC4-A5/lacto-N-biose complex, based on NOE-derived distance restraints
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-13C HSQC aromatic 100 uM [U-98% 13C; U-98% 15N] TgMIC4-A5, 20 mM potassium phosphate, 100 mM sodium chloride, 500 uM Lacto-N-biose 90% H2O/10% D2O 0.7 6.5 ambient 303 2 2D 1H-1H TOCSY 10 mM Lacto-N-biose 100% D2O 3 2D DQF-COSY 10 mM Lacto-N-biose 100% D2O 4 2D 1H-1H NOESY 10 mM Lacto-N-biose 100% D2O 5 2D 1H-13C HSQC 10 mM Lacto-N-biose 100% D2O 6 3D 1H-13C NOESY 100 uM [U-98% 13C; U-98% 15N] TgMIC4-A5, 20 mM potassium phosphate, 100 mM sodium chloride, 500 uM Lacto-N-biose 90% H2O/10% D2O 0.7 6.5 ambient 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing NMRView
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 10 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment NMRView Johnson, One Moon Scientific 2 refinement ARIA 2.1 Linge, O'Donoghue and Nilges 3 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read