☰ Navigation Tabs
Structural Characterization of small heat shock protein (Hsp12)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.2 mM [U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313 2 3D CBCA(CO)NH 1.0 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313 3 3D HNCACB 1.0 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313 4 2D 1H-13C HSQC aliphatic 1.0 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313 5 2D 1H-13C HSQC aromatic 1.0 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313 6 3D C(CO)NH 1.0 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313 7 3D HBHA(CO)NH 1.0 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313 8 3D HCCH-COSY 1.0 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313 9 3D 1H-13C NOESY aliphatic 1.0 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313 10 3D 1H-15N NOESY 1.0 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 100 7.0 ambient 313
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 900 2 Varian INOVA 600
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CYANA Guntert, Mumenthaler and Wuthrich 2 structure solution MOLMOL Koradi, Billeter and Wuthrich 3 collection VnmrJ Varian 4 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 5 chemical shift assignment PINE Bahrami, Markley, Assadi, and Eghbalnia 6 chemical shift assignment TALOS Cornilescu, Delaglio and Bax 7 refinement CYANA Guntert, Mumenthaler and Wuthrich