2L9F
NMR solution structure of meACP
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 50mM sodium phosphate; 50mM sodium chloride; 1mM DTT; 1mM EDTA; 1mM [U-99% 13C; U-99% 15N] meACP; 95% H2O/5% D2O | 95% H2O/5% D2O | 6.85 | ambient | 298 | ||
2 | 2D 1H-13C HSQC | 50mM sodium phosphate; 50mM sodium chloride; 1mM DTT; 1mM EDTA; 1mM [U-99% 13C; U-99% 15N] meACP; 95% H2O/5% D2O | 95% H2O/5% D2O | 6.85 | ambient | 298 | ||
3 | 3D HN(CO)CA | 50mM sodium phosphate; 50mM sodium chloride; 1mM DTT; 1mM EDTA; 1mM [U-99% 13C; U-99% 15N] meACP; 95% H2O/5% D2O | 95% H2O/5% D2O | 6.85 | ambient | 298 | ||
4 | 3D HNCA | 50mM sodium phosphate; 50mM sodium chloride; 1mM DTT; 1mM EDTA; 1mM [U-99% 13C; U-99% 15N] meACP; 95% H2O/5% D2O | 95% H2O/5% D2O | 6.85 | ambient | 298 | ||
5 | 3D MQ (H)CCH-TOCSY | 50mM sodium phosphate; 50mM sodium chloride; 1mM DTT; 1mM EDTA; 1mM [U-99% 13C; U-99% 15N] meACP; 95% H2O/5% D2O | 95% H2O/5% D2O | 6.85 | ambient | 298 | ||
6 | 4D 13C,15N edited-NOESY | 50mM sodium phosphate; 50mM sodium chloride; 1mM DTT; 1mM EDTA; 1mM [U-99% 13C; U-99% 15N] meACP; 95% H2O/5% D2O | 95% H2O/5% D2O | 6.85 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | NMRspy |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | NMRspy | Zheng Yu | |
2 | peak picking | NMRspy | Zheng Yu | |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | geometry optimization | TALOS | Cornilescu, Delaglio and Bax | |
5 | data analysis | Procheck | Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Tho | |
6 | structure solution | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
7 | structure solution | MOLMOL | Koradi, Billeter and Wuthrich | |
8 | refinement | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |