☰ Navigation Tabs
Solution Structure of Cytotoxic T-Lymphocyte Antigent-2(Ctla protein), Crammer at pH 6.0
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.3 mM [U-99% 15N] CRAMMER-1, 10 mM Citric-acid phosphate-2 90% H2O/10% D2O 6 ambient 298 2 2D DQF-COSY 0.5 mM CRAMMER-5, 10 mM Citric-acid phosphate-6 10mM citric-acid phosphate 6 ambient 298 3 2D 1H-1H COSY 0.5 mM CRAMMER-5, 10 mM Citric-acid phosphate-6 10mM citric-acid phosphate 6 ambient 298 4 2D 1H-1H NOESY 0.5 mM CRAMMER-5, 10 mM Citric-acid phosphate-6 10mM citric-acid phosphate 6 ambient 298 5 3D CBCA(CO)NH 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 90% H2O/10% D2O 6 ambient 298 6 3D HNCO 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 90% H2O/10% D2O 6 ambient 298 7 3D HNCA 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 90% H2O/10% D2O 6 ambient 298 8 3D HNCACB 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 90% H2O/10% D2O 6 ambient 298 9 3D HBHA(CO)NH 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 90% H2O/10% D2O 6 ambient 298 10 3D HN(CO)CA 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 90% H2O/10% D2O 6 ambient 298 11 3D 1H-15N NOESY 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 90% H2O/10% D2O 6 ambient 298 12 3D 1H-15N TOCSY 0.5 mM [U-99% 13C; U-99% 15N] CRAMMER-3, 10 mM Citric-acid phosphate-4 90% H2O/10% D2O 6 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AMX 600
NMR Refinement Method Details Software SIMULATED ANNEALING, MOLECULAR DYNAMICS CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 500 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.1 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE, JIANG,KUSZEWSKI,NILGES,PANNU,READ,RICE,SIMONSON,WARREN 2 data analysis CNS 1.1 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE, JIANG,KUSZEWSKI,NILGES,PANNU,READ,RICE,SIMONSON,WARREN 3 structure solution Sparky Goddard 4 chemical shift assignment Sparky Goddard 5 chemical shift calculation Sparky Goddard 6 peak picking Sparky Goddard 7 structure solution PSVS Bhattacharya and Montelione 8 data analysis PSVS Bhattacharya and Montelione 9 structure solution MOLMOL Koradi, Billeter and Wuthrich 10 collection MOLMOL Koradi, Billeter and Wuthrich 11 data analysis MOLMOL Koradi, Billeter and Wuthrich