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Staphylococcus aureus pathogenicity island 1 protein gp6, an internal scaffold in size determination
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-99% 15N] protein, 10 mM sodium phosphate, 200 mM sodium chloride 90% H2O/10% D2O 200 7.0 ambient 293 2 2D 1H-1H TOCSY 1 mM [U-99% 15N] protein, 10 mM sodium phosphate, 200 mM sodium chloride 90% H2O/10% D2O 200 7.0 ambient 293 3 2D 1H-1H NOESY 1 mM [U-99% 15N] protein, 10 mM sodium phosphate, 200 mM sodium chloride 90% H2O/10% D2O 200 7.0 ambient 293 4 3D HN(COCA)CB 1 mM [U-99% 13C; U-99% 15N] protein, 10 mM sodium phosphate, 200 mM sodium chloride 90% H2O/10% D2O 200 7.0 ambient 293 5 3D HN(CO)CA 1 mM [U-99% 13C; U-99% 15N] protein, 10 mM sodium phosphate, 200 mM sodium chloride 90% H2O/10% D2O 200 7.0 ambient 293 6 3D HNCA 1 mM [U-99% 13C; U-99% 15N] protein, 10 mM sodium phosphate, 200 mM sodium chloride 90% H2O/10% D2O 200 7.0 ambient 293 7 3D HNCACB 1 mM [U-99% 13C; U-99% 15N] protein, 10 mM sodium phosphate, 200 mM sodium chloride 90% H2O/10% D2O 200 7.0 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker Ultrashield Plus 700
NMR Refinement Method Details Software simulated annealing NMRView
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment NMRView Johnson, One Moon Scientific 2 peak picking NMRView Johnson, One Moon Scientific 3 refinement CYANA Guntert, Mumenthaler and Wuthrich 4 structure solution CYANA Guntert, Mumenthaler and Wuthrich 5 data analysis ProcheckNMR Laskowski and MacArthur 6 geometry optimization TALOS Cornilescu, Delaglio and Bax 7 collection TopSpin Bruker Biospin