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NMR structure of the protein YP_926445.1 from Shewanella Amazonensis
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 20 mM sodium phosphate, 50 mM sodium chloride, 8 mM DTT, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.5 ambient 298 2 2D 1H-13C HSQC 20 mM sodium phosphate, 50 mM sodium chloride, 8 mM DTT, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.5 ambient 298 3 3D 1H-15N NOESY 20 mM sodium phosphate, 50 mM sodium chloride, 8 mM DTT, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.5 ambient 298 4 3D 1H-13C NOESY (ali) 20 mM sodium phosphate, 50 mM sodium chloride, 8 mM DTT, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.5 ambient 298 5 3D 1H-15N NOESY (Aro) 20 mM sodium phosphate, 50 mM sodium chloride, 8 mM DTT, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.5 ambient 298 6 5D APSY-HACACONH 20 mM sodium phosphate, 50 mM sodium chloride, 8 mM DTT, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.5 ambient 298 7 4D APSY-HACANH 20 mM sodium phosphate, 50 mM sodium chloride, 8 mM DTT, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.5 ambient 298 8 5D APSY-CBCACONH 20 mM sodium phosphate, 50 mM sodium chloride, 8 mM DTT, 4.5 mM sodium azide 95% H2O/5% D2O 0.113 6.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software molecular dynamics OpalP CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA Guntert, Mumenthaler and Wuthrich 2 refinement OPALp Luginbuhl, Guntert, Billeter and Wuthrich 3 collection TopSpin 2.1 Bruker Biospin 4 processing TopSpin 2.1 Bruker Biospin 5 chemical shift assignment CARA Keller and Wuthrich 6 data analysis CARA Keller and Wuthrich 7 peak picking CARA Keller and Wuthrich 8 chemical shift assignment UNIO Herrmann and Wuthrich 9 structure solution UNIO Herrmann and Wuthrich 10 peak picking UNIO Herrmann and Wuthrich