Experiment: 2L4E

NMR structure of the UBA domain of S. cerevisiae Dcn1

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D HNCA	0.6 mM [U-80% 13C; U-90% 15N] Dcn1-UBA, 15 mM potassium phosphate, 110 mM potassium phosphate, 2 mM DTT-4, 2 mM CHAPS, 0.05 % sodium azide	95% H2O/5% D2O	157	6.15	ambient	293
2	3D CBCA(CO)NH	0.6 mM [U-80% 13C; U-90% 15N] Dcn1-UBA, 15 mM potassium phosphate, 110 mM potassium phosphate, 2 mM DTT-4, 2 mM CHAPS, 0.05 % sodium azide	95% H2O/5% D2O	157	6.15	ambient	293
3	3D HCCH-TOCSY	0.6 mM [U-80% 13C; U-90% 15N] Dcn1-UBA, 15 mM potassium phosphate, 110 mM potassium phosphate, 2 mM DTT-4, 2 mM CHAPS, 0.05 % sodium azide	95% H2O/5% D2O	157	6.15	ambient	293
4	3D 1H-15N NOESY	0.55 mM [U-90% 15N] Dcn1-UBA, 15 mM potassium phosphate, 110 mM potassium phosphate, 2 mM DTT, 2 mM CHAPS, 0.05 % sodium azide	95% H2O/5% D2O	157	6.15	ambient	293
5	3D 1H-13C NOESY	0.6 mM [U-80% 13C; U-90% 15N] Dcn1-UBA, 15 mM potassium phosphate, 110 mM potassium phosphate, 2 mM DTT-4, 2 mM CHAPS, 0.05 % sodium azide	95% H2O/5% D2O	157	6.15	ambient	293
6	3D 1H-13Caro NOESY	0.6 mM [U-80% 13C; U-90% 15N] Dcn1-UBA, 15 mM potassium phosphate, 110 mM potassium phosphate, 2 mM DTT-4, 2 mM CHAPS, 0.05 % sodium azide	95% H2O/5% D2O	157	6.15	ambient	293
7	2D 1H-15N HSQC	0.55 mM [U-90% 15N] Dcn1-UBA, 15 mM potassium phosphate, 110 mM potassium phosphate, 2 mM DTT, 2 mM CHAPS, 0.05 % sodium azide	95% H2O/5% D2O	157	6.15	ambient	293

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DRX	500
2	Bruker	DRX	600
3	Bruker	DRX	750
4	Bruker	AVANCE	900

NMR Refinement
Method	Details	Software
molecular dynamics		Unio08

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	40
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	Unio08	1.0.4	Herrmann
2	peak picking	Unio08	1.0.4	Herrmann
3	refinement	Amber	9	Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
4	structure solution	CYANA	2	Guntert, Mumenthaler and Wuthrich
5	collection	XwinNMR		Bruker Biospin
6	processing	XwinNMR		Bruker Biospin
7	processing	TopSpin	2.0	Bruker Biospin
8	data analysis	CARA	1.8.4	Keller