2L0Z | pdb_00002l0z

Solution structure of a zinc-binding domain from the Junin virus envelope glycoprotein

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D DQF-COSY	0.7 mM JUNV ZBD peptide, 50 mM [U-98% 2H] Tris-2, 2.5 mM [U-94.5% 2H] TCEP-3, 5 mM zinc sulfate-4	90% H2O/10% D2O	0	7.2	ambient	298
2	2D 1H-1H TOCSY	0.7 mM JUNV ZBD peptide, 50 mM [U-98% 2H] Tris-2, 2.5 mM [U-94.5% 2H] TCEP-3, 5 mM zinc sulfate-4	90% H2O/10% D2O	0	7.2	ambient	298
3	2D 1H-1H NOESY	0.7 mM JUNV ZBD peptide, 50 mM [U-98% 2H] Tris-2, 2.5 mM [U-94.5% 2H] TCEP-3, 5 mM zinc sulfate-4	90% H2O/10% D2O	0	7.2	ambient	298
4	2D 1H-15N HSQC	0.7 mM JUNV ZBD peptide, 50 mM [U-98% 2H] Tris-2, 2.5 mM [U-94.5% 2H] TCEP-3, 5 mM zinc sulfate-4	90% H2O/10% D2O	0	7.2	ambient	298
5	2D E-COSY	0.7 mM JUNV ZBD peptide, 50 mM [U-98% 2H] Tris-6, 2.5 mM [U-94.5% 2H] TCEP-7, 4 mM zinc sulfate-8	100% D2O	0	7.2	ambient	298
6	2D 1H-13C HSQC	0.7 mM JUNV ZBD peptide, 50 mM [U-98% 2H] Tris-6, 2.5 mM [U-94.5% 2H] TCEP-7, 4 mM zinc sulfate-8	100% D2O	0	7.2	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	NMR System	600

NMR Refinement
Method	Details	Software
molecular dynamics	refinement in explicit solvent (H2O) in Aria	ARIA

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	56
Conformers Submitted Total Number	21
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure solution	ARIA	1.2	Linge, O'Donoghue and Nilges
2	chemical shift assignment	Felix	2004	Felix NMR Inc.
3	peak picking	Felix	2004	Felix NMR Inc.
4	data analysis	Felix	2004	Felix NMR Inc.
5	refinement	ARIA	1.2	Linge, O'Donoghue and Nilges