2L06

Solution NMR structure of the PBS linker polypeptide domain (fragment 254-400) of phycobilisome linker protein ApcE from Synechocystis sp. PCC 6803. Northeast Structural Genomics Consortium Target SgR209C

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
2	2D 1H-13C HSQC	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
3	3D 1H-15N NOESY	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
4	3D 1H-13C NOESY aliph	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
5	4D 1H-13C NOESY	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	100% D2O	100	6.5	ambient	293
6	3D HNCO	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
7	3D CBCA(CO)NH	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
8	3D HNCACB	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
9	3D (H)CC(CO)NH-TOCSY	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
10	3D HCCH-TOCSY	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	100% D2O	100	6.5	ambient	293
11	3D HCCH-COSY	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	100% D2O	100	6.5	ambient	293
12	2D 1H-15N HSQC	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	100% D2O	100	6.5	ambient	293
13	2D 1H-13C HSQC	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.2 mM [U-5% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
14	3D H(CC)(CO)NH-TOCSY	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
15	3D 1H-13C NOESY arom	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
16	(H)CCH-TOCSY	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	100% D2O	100	6.5	ambient	293
17	3D HNCA	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293
18	3D HN(CO)CA	20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein	95% H2O/5% D2O	100	6.5	ambient	293

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	600
2	Bruker	AVANCE III	850
3	Varian	INOVA	500
4	Varian	INOVA	750

NMR Refinement
Method	Details	Software
simulated annealing	CNS water refinement	NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	125
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe	linux9	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	collection	VNMR	6.1C	Varian
3	collection	TopSpin	2.1.4	Bruker Biospin
4	data analysis	AutoStructure	2.2.1	Huang, Tejero, Powers and Montelione
5	structure solution	X-PLOR NIH	2.25	Schwieters, Kuszewski, Tjandra and Clore
6	data analysis	Sparky	3.113	Goddard
7	structure validation	PSVS	1.4	Bhattacharya and Montelione
8	chemical shift assignment	AutoAssign	2.3.0	Zimmerman, Moseley, Kulikowski and Montelione
9	data analysis	PdbStat	5.0	(PDBStat) R. Tejero, G.T. Montelione
10	data analysis	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
11	refinement	X-PLOR NIH	2.25	Schwieters, Kuszewski, Tjandra and Clore

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.