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NMR Structure of Escherichia coli BamE, a Lipoprotein Component of the beta-Barrel Assembly Machinery Complex
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-100% 13C; U-100% 15N] E. coli protein, 15 % D2O, 85 % H2O, 20 mM Na2HPO4/NaH2PO4 85% H2O/15% D2O 0.02 6.6 ambient 288 2 3D CBCA(CO)NH 0.5 mM [U-100% 13C; U-100% 15N] E. coli protein, 15 % D2O, 85 % H2O, 20 mM Na2HPO4/NaH2PO4 85% H2O/15% D2O 0.02 6.6 ambient 288 3 3D 1H-15N NOESY 0.5 mM [U-100% 13C; U-100% 15N] E. coli protein, 15 % D2O, 85 % H2O, 20 mM Na2HPO4/NaH2PO4 85% H2O/15% D2O 0.02 6.6 ambient 288 4 3D HNCO 0.5 mM [U-100% 13C; U-100% 15N] E. coli protein, 15 % D2O, 85 % H2O, 20 mM Na2HPO4/NaH2PO4 85% H2O/15% D2O 0.02 6.6 ambient 288 5 3D HNCACB 0.5 mM [U-100% 13C; U-100% 15N] E. coli protein, 15 % D2O, 85 % H2O, 20 mM Na2HPO4/NaH2PO4 85% H2O/15% D2O 0.02 6.6 ambient 288 6 3D HN(CO)CA 0.5 mM [U-100% 13C; U-100% 15N] E. coli protein, 15 % D2O, 85 % H2O, 20 mM Na2HPO4/NaH2PO4 85% H2O/15% D2O 0.02 6.6 ambient 288 7 3D 1H-13C NOESY 0.5 mM [U-100% 13C; U-100% 15N] E. coli protein, 15 % D2O, 85 % H2O, 20 mM Na2HPO4/NaH2PO4 85% H2O/15% D2O 0.02 6.6 ambient 288 8 2D 1H-1H COSY 0.5 mM [U-100% 13C; U-100% 15N] E. coli protein, 15 % D2O, 85 % H2O, 20 mM Na2HPO4/NaH2PO4 85% H2O/15% D2O 0.02 6.6 ambient 288
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian UNITY 500
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA 2.1 Guntert, Mumenthaler and Wuthrich 2 chemical shift assignment Sparky 3.113 Goddard 3 peak picking Sparky 3.113 Goddard 4 refinement CYANA 2.1 Guntert, Mumenthaler and Wuthrich 5 refinement ARIA 2.0 Rieping, Habeck, Bardiaux, Bernard, Malliavin and Nilges