☰ Navigation Tabs
Signaling state of Photoactive Yellow Protein
SOLUTION NMR - SOLUTION SCATTERING
Solution Scattering Data Acquistion 1 Scattering Type x-ray Radiation/Neutron Source ESRF Synchrotron Y Beamline Type ID09B Detector Type CCD Detector Manufacturer Details Mar133: MAR RESEARCH Temperature (K) 293 pH 7 Numer of Time Frames Used Protein Concentration Range (mg/mL) 64 Sample Buffer 20 MM NACL Data Reduction Software Guiner Mean Radius Of Gyration (nm) 1.46 Sigma Mean Radius Of Gyration R(XS-1) Mean Cross Sectional Radii (nm) R(XS-1) Sigma Mean Cross Sectional Radii R(XS-2) Mean Cross Sectional Radii (nm) R(XS-2) Sigma Mean Cross Sectional Radii P(R) Protein Length (nm)
Solution Scattering Data Analysis and Model Fitting Method Software Software Authors Starting Model Conformers, Number Calculated Conformers, Number Submitted Conformers, Selection Criteria Best Representative Conformer Other Details CNS (NIH SAXS version) Grishaev, Wu, Trewhella, Bax, Brunger, Adams, Clore, Delano, Gros, Grosse-Kunstleve, Jiang, Kuszewski, Nilges, Pannu, Read, Rice, Simonson, Warren 15 14 STRUCTUREs WITH THE LEAST RESTRAINT VIOLATIONS 1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 75 uM PYP, 50 mM potassium phosphate 95% H2O/5% D2O 0 5.75 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE II 500
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 15 Conformers Submitted Total Number 14 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 data analysis DEERANALYSIS2006 Gunnar Jeschke 3 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read