Experiment: 2KWC

The NMR structure of the autophagy-related protein Atg8

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
2	2D 1H-13C HSQC	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
3	3D HNCO	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
4	3D HN(CO)CA	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
5	3D HNCA	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
6	3D HBHA(CO)NH	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
7	3D HN(CA)HA	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
8	3D C(CO)NH	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
9	3D HCCH-TOCSY	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
10	3D CCH-TOCSY	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
11	2D HbCbCgCdHd	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
12	2D HbCbCgCdCeHe	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
13	3D 1H-15N NOESY	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297
14	3D 1H-13C NOESY	0.6mM [U-99% 13C; U-99% 15N] Atg8 K26P; 90% H2O/10% D2O	90% H2O/10% D2O	170	6.8	ambient	297

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	800
2	Varian	INOVA	600

NMR Refinement
Method	Details	Software
torsion angle dynamics		VNMR

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VNMR	6.1C	Varian
2	processing	NMRPipe	5.0	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	data analysis	TALOS	2007.068.09.07	Cornilescu, Delaglio and Bax
4	chemical shift assignment	Sparky	3.113	Goddard
5	peak picking	Sparky	3.113	Goddard
6	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
7	refinement	CYANA	2.1	Guntert, Mumenthaler and Wuthrich