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Solution structure of CI-MPR domain 5 bound to N-acetylglucosaminyl 6-phosphomethylmannoside
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
3D_15N-separated_NOESY
1.25 mM [U-100% 13C; U-100% 15N] CI-MPR domain5-1, 10 mM [U-2H] bis-tris-2, 150 mM sodium chloride-3, 8 mM N-acetylglucosaminyl 6-phosphomethylmannoside-4, 95% H2O, 5% D2O
95% H2O/5% D2O
150
6.5
AMBIENT
308
2
3D_13C-separated_NOESY
1.25 mM [U-100% 13C; U-100% 15N] CI-MPR domain5-1, 10 mM [U-2H] bis-tris-2, 150 mM sodium chloride-3, 8 mM N-acetylglucosaminyl 6-phosphomethylmannoside-4, 95% H2O, 5% D2O
95% H2O/5% D2O
150
6.5
AMBIENT
308
3
3D_13C-separated_NOESY (AROMATIC)
1.25 mM [U-100% 13C; U-100% 15N] CI-MPR domain5-1, 10 mM [U-2H] bis-tris-2, 150 mM sodium chloride-3, 8 mM N-acetylglucosaminyl 6-phosphomethylmannoside-4, 95% H2O, 5% D2O
95% H2O/5% D2O
150
6.5
AMBIENT
308
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AVANCE
600
NMR Refinement
Method
Details
Software
AUTOMATED METHODS WERE USED FOR BACKBONE CHEMICAL SHIFT ASSIGNMENT AND ITERATIVE NOE REFINEMENT. FINAL STRUCTURES WERE OBTAINED BY MOLECULAR DYNAMICS IN EXPLICIT SOLVENT
STRUCTURES ARE BASED ON A TOTAL OF 2325 NOE CONSTRAINTS (416 INTRA, 546 SEQUENTIAL, 271 MEDIUM, and 1092 LONG RANGE) AND 189 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS.
AUTHOR STATES THAT THE DATA WAS COLLECTED IN THE PRESENCE OF BOTH RECEPTOR AND LIGAND N-ACETYLGLUCOSAMINYL 6-PHOSPHOMETHYLMANNOSIDE. HOWEVER THE LIGAND COORDINATES WERE NOT REFINED AND THEREFORE NOT DEPOSITED