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Solution structure of BRD1 PHD1 finger
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O 90% H2O/10% D2O 0.15 6.7 ambient 293 2 3D CBCA(CO)NH 2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O 90% H2O/10% D2O 0.15 6.7 ambient 293 3 3D HNCACB 2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O 90% H2O/10% D2O 0.15 6.7 ambient 293 4 3D HNCO 2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O 90% H2O/10% D2O 0.15 6.7 ambient 293 5 3D HBHA(CO)NH 2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O 90% H2O/10% D2O 0.15 6.7 ambient 293 6 3D C(CO)NH 2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O 90% H2O/10% D2O 0.15 6.7 ambient 293 7 3D H(CCO)NH 2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O 90% H2O/10% D2O 0.15 6.7 ambient 293 8 3D 1H-15N NOESY 2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O 90% H2O/10% D2O 0.15 6.7 ambient 293 9 3D 1H-13C NOESY 2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 20mM Bis-Tris; 150mM sodium chloride; 100% D2O 100% D2O 0.15 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 500
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 2.2 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment Sparky 3 Goddard 3 data analysis Sparky 3 Goddard 4 structure solution CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read 5 refinement CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read 6 processing TALOS Cornilescu, Delaglio and Bax 7 data analysis MOLMOL 2K.2 Koradi, Billeter and Wuthrich