2KU3

Solution structure of BRD1 PHD1 finger


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O90% H2O/10% D2O0.156.7ambient293
23D CBCA(CO)NH2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O90% H2O/10% D2O0.156.7ambient293
33D HNCACB2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O90% H2O/10% D2O0.156.7ambient293
43D HNCO2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O90% H2O/10% D2O0.156.7ambient293
53D HBHA(CO)NH2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O90% H2O/10% D2O0.156.7ambient293
63D C(CO)NH2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O90% H2O/10% D2O0.156.7ambient293
73D H(CCO)NH2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O90% H2O/10% D2O0.156.7ambient293
83D 1H-15N NOESY2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 150mM sodium chloride; 20mM Bis-Tris; 90% H2O/10% D2O90% H2O/10% D2O0.156.7ambient293
93D 1H-13C NOESY2mM ZINC ION; 1mM [U-100% 13C; U-100% 15N] protein; 20mM Bis-Tris; 150mM sodium chloride; 100% D2O100% D2O0.15293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX500
NMR Refinement
MethodDetailsSoftware
simulated annealing, torsion angle dynamicsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.2Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2chemical shift assignmentSparky3Goddard
3data analysisSparky3Goddard
4structure solutionCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
5refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
6processingTALOSCornilescu, Delaglio and Bax
7data analysisMOLMOL2K.2Koradi, Billeter and Wuthrich