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Dynamic Regulation of Archaeal Proteasome Gate Opening as Studied by TROSY-NMR
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-13C HMQC 0.2-3 mM [U-15N; U-2H; Met-1H,Met-CH3-13C] alpha-1, 100 % D2O-2, 25 mM potassium phosphate-3, 50 mM sodium chloride-4, 1 mM EDTA-5, 0.02 % sodium azide-6 100% D2O 6.8 ambient atm 323
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 800
NMR Refinement Method Details Software simulated annealing Sparky
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 166 Conformers Submitted Total Number 50 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis Sparky 3.114 Goddard 2 peak picking Sparky 3.114 Goddard 3 structure solution X-PLOR NIH 2.23 Schwieters, Kuszewski, Tjandra and Clore 4 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 5 data analysis NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 6 refinement X-PLOR NIH 2.23 Schwieters, Kuszewski, Tjandra and Clore