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Solution Structure of the N-terminal Domain of DC-UbP/UBTD2
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1mM [U-100% 15N] protein-1, 20mM sodium phosphate-2, 100mM sodium chloride-3 90% H2O/10% D2O 6.5 ambient 298 2 3D HNHA 1mM [U-100% 15N] protein-1, 20mM sodium phosphate-2, 100mM sodium chloride-3 90% H2O/10% D2O 6.5 ambient 298 3 3D 1H-15N NOESY 1mM [U-100% 15N] protein-1, 20mM sodium phosphate-2, 100mM sodium chloride-3 90% H2O/10% D2O 6.5 ambient 298 4 3D CBCA(CO)NH 1mM [U-100% 13C; U-100% 15N] protein-4, 20mM sodium phosphate-5, 100mM sodium chloride-6 90% H2O/10% D2O 6.5 ambient 298 5 3D HNCACB 1mM [U-100% 13C; U-100% 15N] protein-4, 20mM sodium phosphate-5, 100mM sodium chloride-6 90% H2O/10% D2O 6.5 ambient 298 6 3D C(CO)NH 1mM [U-100% 13C; U-100% 15N] protein-4, 20mM sodium phosphate-5, 100mM sodium chloride-6 90% H2O/10% D2O 6.5 ambient 298 7 3D HNCO 1mM [U-100% 13C; U-100% 15N] protein-4, 20mM sodium phosphate-5, 100mM sodium chloride-6 90% H2O/10% D2O 6.5 ambient 298 8 3D HCCH-TOCSY 1mM [U-100% 13C; U-100% 15N] protein-4, 20mM sodium phosphate-5, 100mM sodium chloride-6 90% H2O/10% D2O 6.5 ambient 298 9 3D HCCH-COSY 1mM [U-100% 13C; U-100% 15N] protein-4, 20mM sodium phosphate-5, 100mM sodium chloride-6 90% H2O/10% D2O 6.5 ambient 298 10 3D 1H-13C NOESY 1mM [U-100% 13C; U-100% 15N] protein-4, 20mM sodium phosphate-5, 100mM sodium chloride-6 90% H2O/10% D2O 6.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software torsion angle dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 peak picking Sparky Goddard 3 chemical shift assignment Sparky Goddard 4 structure solution ARIA 2.0 Linge, O'Donoghue and Nilges 5 refinement ARIA 2.0 Linge, O'Donoghue and Nilges 6 data analysis ProcheckNMR Laskowski and MacArthur