2KSH
Solution NMR structure of apo Sterol Carrier Protein - 2 from Aedes aegypti (AeSCP-2)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 2 mM [U-100% 13C; U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
2 | 2D 1H-13C HSQC | 2 mM [U-100% 13C; U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
3 | 3D HNCACB | 2 mM [U-100% 13C; U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
4 | 3D CBCA(CO)NH | 2 mM [U-100% 13C; U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
5 | 3D HCCH-TOCSY | 2 mM [U-100% 13C; U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
6 | 3D H(CCO)NH | 2 mM [U-100% 13C; U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
7 | 3D 1H-15N NOESY | 2 mM [U-100% 13C; U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
8 | 3D 1H-13C NOESY | 2 mM [U-100% 13C; U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
9 | 3D HNCO | 2 mM [U-100% 13C; U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
10 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
11 | 2D 1H-15N TROSY | 1 mM [U-100% 15N] AeSCP-2 | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
12 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] AESCP-2, 15 mg/ml Pf1 phage | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 | |
13 | 2D 1H-15N TROSY | 1 mM [U-100% 15N] AESCP-2, 15 mg/ml Pf1 phage | 93% H2O/7% D2O | 10 | 7.8 | AMBIENT | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 900 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | 3.0 | P.GUNTERT ET AL. |
2 | data analysis | MOLMOL | Koradi, Billeter and Wuthrich | |
3 | processing | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
5 | chemical shift assignment | PINE | Bahrami, Markley, Assadi, and Eghbalnia | |
6 | data analysis | PSVS | Bhattacharya and Montelione | |
7 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
8 | collection | VnmrJ | Varian | |
9 | data analysis | XEASY | Bartels et al. | |
10 | refinement | CYANA | 3.0 | P.GUNTERT ET AL. |