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NMR solution structure of A2LD1 (gi:13879369)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 5D APSY CBCACONH 1.1 mM [U-100% 13C; U-100% 15N] gi-13879369, 25 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM [U-100% 2H] DTT, 0.5 mM DTT 90% H2O/10% D2O 80.25 6.0 ambient 298 2 5D APSY HACACONH 1.1 mM [U-100% 13C; U-100% 15N] gi-13879369, 25 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM [U-100% 2H] DTT, 0.5 mM DTT 90% H2O/10% D2O 80.25 6.0 ambient 298 3 4D APSY HACANH 1.1 mM [U-100% 13C; U-100% 15N] gi-13879369, 25 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM [U-100% 2H] DTT, 0.5 mM DTT 90% H2O/10% D2O 80.25 6.0 ambient 298 4 3D APSY (HA)CANH 1.1 mM [U-100% 13C; U-100% 15N] gi-13879369, 25 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM [U-100% 2H] DTT, 0.5 mM DTT 90% H2O/10% D2O 80.25 6.0 ambient 298 5 3D HNCA 1.1 mM [U-100% 13C; U-100% 15N] gi-13879369, 25 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM [U-100% 2H] DTT, 0.5 mM DTT 90% H2O/10% D2O 80.25 6.0 ambient 298 6 3D aliphatic 1H-13C NOESY 1.1 mM [U-100% 13C; U-100% 15N] gi-13879369, 25 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM [U-100% 2H] DTT, 0.5 mM DTT 90% H2O/10% D2O 80.25 6.0 ambient 298 7 3D aromatic 1H-13C NOESY 1.1 mM [U-100% 13C; U-100% 15N] gi-13879369, 25 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM [U-100% 2H] DTT, 0.5 mM DTT 90% H2O/10% D2O 80.25 6.0 ambient 298 8 3D 1H-15N NOESY 1.1 mM [U-100% 13C; U-100% 15N] gi-13879369, 25 mM sodium phosphate, 50 mM sodium chloride, 4.5 mM [U-100% 2H] DTT, 0.5 mM DTT 90% H2O/10% D2O 80.25 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing CARA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CARA Keller and Wuthrich 2 peak picking ATNOS Herrmann, Guntert and Wuthrich 3 collection of distance restraints CANDID Herrmann, Guntert and Wuthrich 4 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 5 refinement OPAL Luginbuhl, Guntert, Billeter and Wuthrich 6 geometric analysis of 2d apsy projections GAPRO Hiller, Fiorito, Wider Wuthrich 7 backbione assignment from apsy peaks MATCH Volk, Herrmann, Wuthrich 8 sidechain assignment with noesy spectra ASCAN Fiorito, Herrmann, Wuthrich