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Solution structure of C-terminal Domain of Tyrosine-protein kinase ABL2 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) target HR5537A
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.2 mM [U-100% 15N] protein 95% H2O/5% D2O 0.2 4.5 ambient 298 2 2D 1H-13C HSQC 1.2 mM [U-10% 13C; U-100% 15N] protein 95% H2O/5% D2O 0.2 4.5 ambient 298 3 3D CBCA(CO)NH 1.2 mM [U-100% 15N] protein 95% H2O/5% D2O 0.2 4.5 ambient 298 4 3D HNCO 1.2 mM [U-100% 15N] protein 95% H2O/5% D2O 0.2 4.5 ambient 298 5 3D HNCACB 1.2 mM [U-100% 15N] protein 95% H2O/5% D2O 0.2 4.5 ambient 298 6 3D 1H-13C NOESY 1.2 mM [U-100% 13C; U-100% 15N] protein 100% D2O 0.2 4.5 ambient 298 7 3D HBHA(CO)NH 1.2 mM [U-100% 15N] protein 95% H2O/5% D2O 0.2 4.5 ambient 298 8 3D C(CO)NH 1.2 mM [U-100% 15N] protein 95% H2O/5% D2O 0.2 4.5 ambient 298 9 3D HCCH-TOCSY 1.2 mM [U-100% 15N] protein 95% H2O/5% D2O 0.2 4.5 ambient 298 10 3D 1H-13C-15N simutaneous NOESY 1.2 mM [U-100% 15N] protein 95% H2O/5% D2O 0.2 4.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Varian INOVA 600
NMR Refinement Method Details Software molecular dynamics, simulated annealing, distance geometry CNS
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read 2 refinement CYANA 3.0 Guntert, Mumenthaler and Wuthrich 3 geometry optimization CYANA 3.0 Guntert, Mumenthaler and Wuthrich 4 structure solution CYANA 3.0 Guntert, Mumenthaler and Wuthrich 5 refinement AutoStructure 2.1 Huang, Tejero, Powers and Montelione 6 data analysis AutoStructure 2.1 Huang, Tejero, Powers and Montelione 7 chemical shift assignment AutoAssign 2.1 Zimmerman, Moseley, Kulikowski and Montelione 8 data analysis AutoAssign 2.1 Zimmerman, Moseley, Kulikowski and Montelione 9 chemical shift assignment XEASY 1.3 Bartels et al. 10 data analysis XEASY 1.3 Bartels et al. 11 peak picking XEASY 1.3 Bartels et al. 12 processing NMRPipe 1.3 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 13 collection VnmrJ 1.3 Varian 14 collection TopSpin 1.3 Bruker Biospin