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Solution Structure of the carboxy-terminal domain of OmpATb, a pore forming protein from Mycobacterium tuberculosis
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 50 mM sodium phosphate 90% H2O/10% D2O 100 6.0 ambient 300 2 2D 1H-15N HSQC 50 mM sodium phosphate 90% H2O/10% D2O 100 6.0 ambient 300 3 3D 1H-15N NOESY 50 mM sodium phosphate 90% H2O/10% D2O 100 6.0 ambient 300 4 3D HNCA 50 mM sodium phosphate 90% H2O/10% D2O 100 6.0 ambient 300 5 3D CBCA(CO)NH 50 mM sodium phosphate 90% H2O/10% D2O 100 6.0 ambient 300 6 3D HNCO 50 mM sodium phosphate 90% H2O/10% D2O 100 6.0 ambient 300 7 3D HCACO 50 mM sodium phosphate 90% H2O/10% D2O 100 6.0 ambient 300 8 2D 1H-15N HSQC 50 mM sodium phosphate 90% H2O/10% D2O 100 6.0 ambient 300 9 2D 1H-1H NOESY 50 mM sodium phosphate 90% H2O/10% D2O 100 3.5 ambient 300 10 3D 1H-15N NOESY 50 mM sodium phosphate 90% H2O/10% D2O 100 6.0 ambient 300
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 500
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing, minimization Cyana, Amber Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber 8 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm 2 structure solution CYANA 2.1 Guntert, Mumenthaler and Wuthrich 3 processing Gifa 4 Delsuc 4 collection XwinNMR Bruker Biospin