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Solution structure of SH3 domain of PTK6
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCACB 0.2mM [U-99% 13C; U-99% 15N] SH domain-2 90% H2O/10% D2O 100 7 AMBIENT 298 2 3D HNCA 0.2mM [U-99% 13C; U-99% 15N] SH domain-2 90% H2O/10% D2O 100 7 AMBIENT 298 3 3D HNCO 0.2mM [U-99% 13C; U-99% 15N] SH domain-2 90% H2O/10% D2O 100 7 AMBIENT 298 4 3D CBCA(CO)NH 0.2mM [U-99% 13C; U-99% 15N] SH domain-2 90% H2O/10% D2O 100 7 AMBIENT 298 5 3D HBHA(CO)NH 0.2mM [U-99% 13C; U-99% 15N] SH domain-2 90% H2O/10% D2O 100 7 AMBIENT 298 6 3D HCCH-TOCSY 0.2mM [U-99% 13C; U-99% 15N] SH domain-2 90% H2O/10% D2O 100 7 AMBIENT 298 7 3D 1H-15N NOESY 0.2mM [U-99% 15N] SH domain-1 90% H2O/10% D2O 100 7 AMBIENT 298 8 3D 1H-13C NOESY 0.2mM [U-99% 13C; U-99% 15N] SH domain-2 90% H2O/10% D2O 100 7 AMBIENT 298 9 2D 1H-15N HSQC 0.2mM [U-99% 15N] SH domain-1 90% H2O/10% D2O 100 7 AMBIENT 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Varian INOVA 900
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA 2.2.5 Guntert, Mumenthaler and Wuthrich 2 refinement CYANA 2.2.5 Guntert, Mumenthaler and Wuthrich 3 data analysis NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 chemical shift assignment AutoAssign Zimmerman, Moseley, Kulikowski and Montelione 5 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 6 chemical shift assignment Sparky Goddard 7 peak picking Sparky Goddard 8 structure analysis MOLMOL Koradi, Billeter and Wuthrich 9 structure analysis PyMOL DeLano Scientific LLC. 10 peak picking PyMOL DeLano Scientific LLC.