SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.45mM [U-99% 15N] gadd45a-7, 20mM sodium phosphate-8, 100mM potassium chloride-9, 2mM DTT-10, 2mM EDTA-11, 0.03% sodium azide-1293% H2O/7% D2O0.277.4ambient298
22D 1H-13C HMQC-aliphatic0.45mM [U-99% 13C; U-99% 15N] gadd45a-1, 20mM sodium phosphate-2, 100mM potassium chloride-3, 2mM DTT-4, 2mM EDTA-5, 0.03% sodium azide-693% H2O/7% D2O0.277.4ambient298
33D HNCO0.45mM [U-99% 13C; U-99% 15N] gadd45a-1, 20mM sodium phosphate-2, 100mM potassium chloride-3, 2mM DTT-4, 2mM EDTA-5, 0.03% sodium azide-693% H2O/7% D2O0.277.4ambient298
43D HNCA0.45mM [U-99% 13C; U-99% 15N] gadd45a-1, 20mM sodium phosphate-2, 100mM potassium chloride-3, 2mM DTT-4, 2mM EDTA-5, 0.03% sodium azide-693% H2O/7% D2O0.277.4ambient298
53D HNCACB0.45mM [U-99% 13C; U-99% 15N] gadd45a-1, 20mM sodium phosphate-2, 100mM potassium chloride-3, 2mM DTT-4, 2mM EDTA-5, 0.03% sodium azide-693% H2O/7% D2O0.277.4ambient298
63D CBCA(CO)NH0.45mM [U-99% 13C; U-99% 15N] gadd45a-1, 20mM sodium phosphate-2, 100mM potassium chloride-3, 2mM DTT-4, 2mM EDTA-5, 0.03% sodium azide-693% H2O/7% D2O0.277.4ambient298
73D HN(CO)CA0.45mM [U-99% 13C; U-99% 15N] gadd45a-1, 20mM sodium phosphate-2, 100mM potassium chloride-3, 2mM DTT-4, 2mM EDTA-5, 0.03% sodium azide-693% H2O/7% D2O0.277.4ambient298
83D HNHA0.45mM [U-99% 15N] gadd45a-7, 20mM sodium phosphate-8, 100mM potassium chloride-9, 2mM DTT-10, 2mM EDTA-11, 0.03% sodium azide-1293% H2O/7% D2O0.277.4ambient298
93D 1H-15N NOESY0.45mM [U-99% 15N] gadd45a-7, 20mM sodium phosphate-8, 100mM potassium chloride-9, 2mM DTT-10, 2mM EDTA-11, 0.03% sodium azide-1293% H2O/7% D2O0.277.4ambient298
102D 1H-1H NOESY0.195mM gadd45a-13, 20mM sodium phosphate-14, 100mM potassium chloride-15, 2mM DTT-16, 2mM EDTA-17, 0.03% sodium azide-18100% D2O0.277.4ambient298
112D 1H-15N HSQC0.45mM [U-15N]-Leu gadd45a-19, 20mM sodium phosphate-20, 100mM potassium chloride-21, 2mM DTT-22, 2mM EDTA-23, 0.03% sodium azide-2493% H2O/7% D2O0.277.4ambient298
122D 1H-15N HSQC0.45mM [U-15N]-Val gadd45a-25, 20mM sodium phosphate-26, 100mM potassium chloride-27, 2mM DTT-28, 2mM EDTA-29, 0.03% sodium azide-3093% H2O/7% D2O0.277.4ambient298
132D 1H-15N HSQC0.45mM [U-15N]-Ile gadd45a-31, 20mM sodium phosphate-32, 100mM potassium chloride-33, 2mM DTT-34, 2mM EDTA-35, 0.03% sodium azide-3693% H2O/7% D2O0.277.4ambient298
142D 1H-15N HSQC0.45mM [U-15N]-Phe/Tyr gadd45a-37, 20mM sodium phosphate-38, 100mM potassium chloride-39, 2mM DTT-40, 2mM EDTA-41, 0.03% sodium azide-4293% H2O/7% D2O0.277.4ambient298
152D 1H-13C HMQC-aromatic0.45mM [U-99% 13C; U-99% 15N] gadd45a-1, 20mM sodium phosphate-2, 100mM potassium chloride-3, 2mM DTT-4, 2mM EDTA-5, 0.03% sodium azide-693% H2O/7% D2O0.277.4ambient298
164D 1H-15N 1H-13C NOESY0.45mM [U-99% 13C; U-99% 15N] gadd45a-1, 20mM sodium phosphate-2, 100mM potassium chloride-3, 2mM DTT-4, 2mM EDTA-5, 0.03% sodium azide-693% H2O/7% D2O0.277.4ambient298
172D 1H-15N HSQC-TROSY0.45mM [U-99% 15N] gadd45a-7, 20mM sodium phosphate-8, 100mM potassium chloride-9, 2mM DTT-10, 2mM EDTA-11, 0.03% sodium azide-1293% H2O/7% D2O0.277.4ambient298
182D 1H-15N HSQC-TROSY0.45mM [U-99% 15N] gadd45a-43, 20mM sodium phosphate-44, 100mM potassium chloride-45, 2mM DTT-46, 2mM EDTA-47, 0.03% sodium azide-48, 10 mg/mL Pf1 phage-4993% H2O/7% D2O0.277.4ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE II800
3BrukerAVANCE II900
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAMBER 9 explicit water using Gibbs-Boltzman methodNMRPipe
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe1.02Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2collectionXwinNMR3.5Bruker Biospin
3processingNMRDraw2.3Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
5refinementAmber9Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
6collectionTopSpin2.1Bruker Biospin
7data analysisTopSpin2.1Bruker Biospin