SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1.0mM K10 RNA; 95% H2O/5% D2O95% H2O/5% D2O0.016.0ambient298
22D 1H-1H NOESY1.0mM K10 RNA; 100% D2O100% D2O0.016.0ambient298
32D 1H-1H TOCSY1.0mM K10 RNA; 100% D2O100% D2O0.016.0ambient298
42D DQF-COSY1.0mM K10 RNA; 100% D2O100% D2O0.016.0ambient298
52D HP COSY1.0mM K10 RNA; 100% D2O100% D2O0.016.0ambient298
62D 1H-1H NOESY1.0mM K10 RNA; 95% H2O/5% D2O95% H2O/5% D2O0.016.0ambient298
72D 1H-1H NOESY1.0mM K10 RNA; 100% D2O100% D2O0.016.0ambient298
82D HNN COSY0.8mM [U-99% 13C; U-99% 15N] K10 RNA; 5% D2O95% H2O/5% D2O0.016.0ambient298
93D HCCH-TOCSY0.8mM [U-99% 13C; U-99% 15N] K10 RNA; 100% D2O100% D2O0.016.0ambient298
103D HCCH-COSY0.8mM [U-99% 13C; U-99% 15N] K10 RNA; 100% D2O100% D2O0.016.0ambient298
113D 13C NOESY-HSQC0.8mM [U-99% 13C; U-99% 15N] K10 RNA; 100% D2O100% D2O0.016.0ambient298
123D HCP0.8mM [U-99% 13C; U-99% 15N] K10 RNA; 100% D2O100% D2O0.016.0ambient298
133D 13C HMQC TOCSY0.8mM [U-99% 13C; U-99% 15N] K10 RNA; 100% D2O100% D2O0.016.0ambient298
142D 13C CT-TROSY0.8mM [U-99% 13C; U-99% 15N] K10 RNA; 100% D2O100% D2O0.016.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
simulated annealing, restrained molecular dynamics with RDCsTopSpin
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number12
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsSTRUCTURE WAS DETERMINED USING TRIPLE RESONANCE, MULTIDIMENSIONAL NMR SPECTROSCOPY AND TROSY-TYPE EXPERIMENTS TO MEASURE RESIDUAL DIPOLAR COUPLINGS
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingTopSpinBruker Biospin
3chemical shift assignmentSparkyGoddard
4peak pickingSparkyGoddard
5structure solutionX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
6refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore