2KCW

Solution structure of Apo-form YjaB from Escherichia coli

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	30mM TRIS, 100mM sodium chloride, 10mM DTT, 1 mM [U-13C; U-15N] YjaB protein	90% H2O/10% D2O	130	7.5	ambient	298
2	3D 1H-15N NOESY	30mM TRIS, 100mM sodium chloride, 10mM DTT, 1 mM [U-13C; U-15N] YjaB protein	90% H2O/10% D2O	130	7.5	ambient	298
3	3D 1H-13C NOESY	30mM TRIS, 100mM sodium chloride, 10mM DTT, 1 mM [U-13C; U-15N] YjaB protein	90% H2O/10% D2O	130	7.5	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
molecular dynamics		NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	21
Representative Model	1 (minimized average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe	2.1	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	data analysis	NMRView	5	Johnson, One Moon Scientific
3	collection	XwinNMR	3.5	Bruker Biospin
4	structure solution	CYANA	2.0	Guntert, Mumenthaler and Wuthrich
5	refinement	Amber	7	Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo and Kollm