☰ Navigation Tabs
The NMR solution structure of the isolated Apo Pin1 WW domain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D DQF-COSY mM PIN1, 50 mM potassium phosphate-2, 0.02% v/v sodium azide-3, trace % DSS-4 90% H2O/10% D2O 0 6.2 ambient 278 2 2D 1H-1H TOCSY mM PIN1, 50 mM potassium phosphate-2, 0.02% v/v sodium azide-3, trace % DSS-4 90% H2O/10% D2O 0 6.2 ambient 278 3 2D 1H-1H NOESY mM PIN1, 50 mM potassium phosphate-2, 0.02% v/v sodium azide-3, trace % DSS-4 90% H2O/10% D2O 0 6.2 ambient 278 4 2D DQF-COSY mM PIN1, 50 mM potassium phosphate-6, 0.02% v/v sodium azide-7, trace % DSS-8 100% D2O 0 6.2 ambient 278 5 2D 1H-1H TOCSY mM PIN1, 50 mM potassium phosphate-6, 0.02% v/v sodium azide-7, trace % DSS-8 100% D2O 0 6.2 ambient 278 6 2D 1H-1H NOESY mM PIN1, 50 mM potassium phosphate-6, 0.02% v/v sodium azide-7, trace % DSS-8 100% D2O 0 6.2 ambient 278
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AMX 600 2 Bruker DMX 750 3 Bruker DRX 800
NMR Refinement Method Details Software simulated annealing, molecular dynamics PROSA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing PROSA Guntert 2 chemical shift assignment XEASY Bartels et al. 3 peak picking XEASY Bartels et al. 4 chemical shift assignment GARANT Bartels, Guntert, Billeter and Wuthrich 5 refinement Amber OPAL Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm 6 structure solution DYANA Guntert, Braun and Wuthrich