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Solution structure of protein BPP2914 from Bordetella parapertussis. Northeast Structural Genomics Consortium target BpR206
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.3 mM [U-5% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278 2 2D 1H-13C HSQC 0.3 mM [U-5% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278 3 3D CBCA(CO)NH 0.3 mM [U-5% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278 4 3D HNCACB 0.3 mM [U-5% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278 5 3D HBHA(CO)NH 0.3 mM [U-5% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278 6 3D HCCH-TOCSY 0.3 mM [U-5% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278 7 (4,3)D GFT HCCH-COSY 0.3 mM [U-5% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278 8 3D, 15N-13C RESOLVED SIMULTANIOUS NOESY 0.3 mM [U-5% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278 9 3D HNCO 0.3 mM [U-5% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278 10 2D 1H-13C HSQC 0.3 mM [U-100% 13C; U-100% 15N] protein 90% H2O/10% D2O 0.2 4.5 ambient 278
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 750
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 structure solution CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment AutoAssign Zimmerman, Moseley, Kulikowski and Montelione 4 structure solution AutoStructure Huang, Tejero, Powers and Montelione 5 peak picking XEASY Bartels et al. 6 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 7 data analysis PSVS Bhattacharya and Montelione