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Truncated AcrA from Campylobacter jejuni for glycosylation studies
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-100% 13C; U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 95% H2O/5% D2O 50 6.4 ambient 303 2 2D 1H-13C HSQC 1 mM [U-100% 13C; U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 95% H2O/5% D2O 50 6.4 ambient 303 3 2D 1H-1H NOESY 1 mM [U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 95% H2O/5% D2O 50 6.4 ambient 303 4 2D 1H-1H NOESY 1 mM [U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 100% D2O 50 6.4 ambient 303 5 3D HNCACB 1 mM [U-100% 13C; U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 95% H2O/5% D2O 50 6.4 ambient 303 6 3D HNCA 1 mM [U-100% 13C; U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 95% H2O/5% D2O 50 6.4 ambient 303 7 3D HN(CO)CA 1 mM [U-100% 13C; U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 95% H2O/5% D2O 50 6.4 ambient 303 8 2D 1H-15N HSQC 1 mM [U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 100% D2O 50 6.4 ambient 303 9 3D HCCH-TOCSY 1 mM [U-100% 13C; U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 95% H2O/5% D2O 50 6.4 ambient 303 10 3D 1H-13C NOESY 1 mM [U-100% 13C; U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 95% H2O/5% D2O 50 6.4 ambient 303 11 3D 1H-15N NOESY 1 mM [U-100% 15N] AcrA(61-210DD), 50 mM potassium phosphate 95% H2O/5% D2O 50 6.4 ambient 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900 2 Bruker AVANCE 750 3 Bruker AVANCE 600 4 Bruker AVANCE 500
NMR Refinement Method Details Software simulated annealing Amber
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber 8 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman 2 geometry optimization ATNOSCANDID Herrmann, Guntert, Wuthrich 3 chemical shift assignment Sparky Goddard 4 processing TopSpin 2.0 Bruker Biospin