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Solution structure of C-terminal domain of APOBEC3G
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 300 mM [U-100% 15N] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 2 2D 1H-13C HSQC 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 3 3D HNCO 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 4 3D HNCA 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 5 3D HNCACB 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 6 3D HN(CO)CA 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 7 3D H(CCO)NH 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 8 3D HNCACO 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 9 3D HN(COCA)CB 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 10 3D C(CO)NH 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 11 3D HCCH-TOCSY 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 12 3D 1H-15N NOESY 300 mM [U-100% 15N, 80%2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 13 3D 1H-13C NOESY 300 mM [U-100% 13C; U-100% 15N; 80% 2H] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293 14 3D 1H-15N NOESY 300 mM [U-100% 15N] Apobec3G 95% H2O/5% D2O 0 7.4 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 800 3 Varian INOVA 900
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics CNS
NMR Ensemble Information Conformer Selection Criteria lowest energy, ramachandran parameters Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.2 Brunger, A.T. et al. 2 data analysis CARA 1.8.3 Keller, R. et al. 3 chemical shift assignment CARA 1.8.3 Keller, R. et al. 4 processing NMRDraw 2.5 Delaglio, F. et al. 5 chemical shift assignment NMRDraw 2.5 Delaglio, F. et al. 6 structure solution Atnos/Candid 1.1 Herrmann, T. et al. 7 chemical shift assignment Atnos/Candid 1.1 Herrmann, T. et al.