2JYT
Human Granulin C, isomer 1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 10 mM sodium phosphate, 150 mM sodium chloride, 0.2 mM EDTA, 0.5-1.0 mM HgrnC1 | 90% H2O/10% D2O | 6.8 | ambient atm | 298 | ||
2 | 2D 1H-1H NOESY | 10 mM sodium phosphate, 150 mM sodium chloride, 0.2 mM EDTA, 0.5-1.0 mM HgrnC1 | 90% H2O/10% D2O | 6.8 | ambient atm | 298 | ||
3 | inphase COSY | 10 mM sodium phosphate, 150 mM sodium chloride, 0.2 mM EDTA, 0.5-1.0 mM HgrnC1 | 90% H2O/10% D2O | 6.8 | ambient atm | 298 | ||
4 | 2D 1H-1H TOCSY | 10 mM sodium phosphate, 150 mM sodium chloride, 0.2 mM EDTA, 0.5-1.0 mM HgrnC1 | 100% D2O | 6.8 | ambient atm | 298 | ||
5 | 2D 1H-1H NOESY | 10 mM sodium phosphate, 150 mM sodium chloride, 0.2 mM EDTA, 0.5-1.0 mM HgrnC1 | 100% D2O | 6.8 | ambient atm | 298 | ||
6 | 2D 1H-13C HSQC | 10 mM sodium phosphate, 150 mM sodium chloride, 0.2 mM EDTA, 0.5-1.0 mM HgrnC1 | 100% D2O | 6.8 | ambient atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | AVANCE | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | ARIA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 60 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | ARIA | 1.0 | Linge, O'Donoghue and Nilges |
2 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | data analysis | SYBYL | Tripos | |
5 | data analysis | Insight II | Accelrys Software Inc. | |
6 | data analysis | MOLMOL | Koradi, Billeter and Wuthrich | |
7 | refinement | ARIA | 1.0 | Linge, O'Donoghue and Nilges |