2JYO
NMR Solution structure of Human MIP-3alpha/CCL20
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 0.9 mM Protein | 90% H2O/10% D2O | 4.2 | ambient | 298 | ||
2 | 2D 1H-1H TOCSY | 0.9 mM Protein | 90% H2O/10% D2O | 4.2 | ambient | 298 | ||
3 | 2D DQF-COSY | 0.9 mM Protein | 90% H2O/10% D2O | 4.2 | ambient | 298 | ||
4 | 2D 1H-1H NOESY | 0.9 mM Protein | 100% D2O | 4.2 | ambient | 298 | ||
5 | 2D 1H-1H TOCSY | 0.9 mM Protein | 100% D2O | 4.2 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 700 |
2 | Bruker | AVANCE | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
DGSA-distance geometry simulated annealing | In total, 2362 restraints were used: 1827 unambiguous NOE restraints, 455 ambiguous restraints, 64 broad dihedral restraints and 16 hydrogen bonding restraints. | ARIA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | ARIA | Linge, J.P. et al. | |
2 | refinement | CNS | 1.1 | Brunger, A.T. et al. |
3 | data analysis | NMRView | 5.0.4 | Johnson, B. et al. |
4 | collection | XwinNMR | 3.0, 3.5 | Bruker Biospin |