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NMR structure of Ubiquilin 1 UBA domain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 20 mM sodium phosphate, 0.05 % sodium azide 93% H2O/7% D2O 20 mM 6.8 ambient 296 2 2D 1H-1H TOCSY 20 mM sodium phosphate, 0.05 % sodium azide 93% H2O/7% D2O 20 mM 6.8 ambient 296 3 2D 1H-1H NOESY 20 mM sodium phosphate, 0.05 % sodium azide 93% H2O/7% D2O 20 mM 6.8 ambient 296 4 3D 15N-SEPARATED TOCSY 20 mM sodium phosphate 90% H2O/10% D2O 20 mM 6.8 ambient 296 5 2D 1H-15N IPAP HSQC 20 mM sodium phosphate 90% H2O/10% D2O 20 mM 6.8 ambient 296 6 HMQC-J 20 mM sodium phosphate 90% H2O/10% D2O 20 mM 6.8 ambient 296 7 15N R1 AND R2 20 mM sodium phosphate 90% H2O/10% D2O 20 mM 6.8 ambient 296 8 15N{1H} NOE 20 mM sodium phosphate 90% H2O/10% D2O 20 mM 6.8 ambient 296
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics ARIA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 1000 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution ARIA Linge, O'Donoghue and Nilges 2 geometry optimization ARIA Linge, O'Donoghue and Nilges 3 refinement ARIA Linge, O'Donoghue and Nilges