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NMR Structure of 50S Ribosomal Protein L14e from Sulfolobus Solfataricus: Northeast Structural Genomics Consortium Target SSR105
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-100% 13C; U-100% 15N] entity 90% H2O/10% D2O 320 7.0 ambient 298 2 2D 1H-13C HSQC 0.5 mM [U-100% 13C; U-100% 15N] entity 90% H2O/10% D2O 320 7.0 ambient 298 3 3D CBCA(CO)NH 0.5 mM [U-100% 13C; U-100% 15N] entity 90% H2O/10% D2O 320 7.0 ambient 298 4 3D HNCACB 0.5 mM [U-100% 13C; U-100% 15N] entity 90% H2O/10% D2O 320 7.0 ambient 298 5 3D HNCO 0.5 mM [U-100% 13C; U-100% 15N] entity 90% H2O/10% D2O 320 7.0 ambient 298 6 3D HBHA(CO)NH 0.5 mM [U-100% 13C; U-100% 15N] entity 90% H2O/10% D2O 320 7.0 ambient 298 7 4,3 D GFT HCCH COFY 0.5 mM [U-100% 13C; U-100% 15N] entity 90% H2O/10% D2O 320 7.0 ambient 298 8 3D HCCH-COSY 0.5 mM [U-100% 13C; U-100% 15N] entity 90% H2O/10% D2O 320 7.0 ambient 298 9 3D Simultanious NOESY 0.5 mM [U-100% 13C; U-100% 15N] entity 90% H2O/10% D2O 320 7.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 750 2 Varian INOVA 600
NMR Refinement Method Details Software simulated annealing CNS waterbath refinement is performed to refine the structure VNMR
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR Varian 2 data analysis AutoAssign Zimmerman, Moseley, Kulikowski, Montelione 3 refinement AutoStructure Huang, Swapna, Rajan, Ke, Xia, Shukla, Inouye and Montelione 4 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 5 refinement CYANA Guntert, Mumenthaler and Wuthrich 6 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 7 data analysis MOLMOL Koradi, Billeter and Wuthrich