2JOS
Solution structure of piscidin in presence of DPC micelles
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D DQF-COSY | 1 mM piscidin-1 in pure water | 90% H2O/10% D2O | 5.0 | ambient | 300 | ||
2 | 2D 1H-1H TOCSY | 1 mM piscidin-1 in pure water | 90% H2O/10% D2O | 5.0 | ambient | 300 | ||
3 | 2D 1H-1H NOESY | 1 mM piscidin-1 in pure water | 90% H2O/10% D2O | 5.0 | ambient | 300 | ||
4 | 2D 1H-1H COSY | 1 mM piscidin-1 in micellar environment | 90% H2O/10% D2O | 5.0 | ambient | 300 | ||
5 | 2D 1H-1H TOCSY | 1 mM piscidin-1 in micellar environment | 90% H2O/10% D2O | 5.0 | ambient | 300 | ||
6 | 2D 1H-1H NOESY | 1 mM piscidin-1 in micellar environment | 90% H2O/10% D2O | 5.0 | ambient | 300 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
distance geometry | DYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 60 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | DYANA | 1.5 | Guntert, Braun and Wuthrich |
2 | collection | XwinNMR | Bruker Biospin | |
3 | processing | XwinNMR | Bruker Biospin | |
4 | chemical shift assignment | XwinNMR | Bruker Biospin | |
5 | refinement | DYANA | 1.5 | Guntert, Braun and Wuthrich |