2JNR
Discovery and optimization of a natural HIV-1 entry inhibitor targeting the gp41 fusion peptide
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 0.75 mM VIR165, 0.75 mM FP1-23, 3%DMSO added | 90% H2O/10% D2O | 0 | 4.7 | ambient | 298 | |
2 | 2D DQF-COSY | 0.75 mM VIR165, 0.75 mM FP1-23, 3%DMSO added | 90% H2O/10% D2O | 0 | 4.7 | ambient | 298 | |
3 | 2D 1H-1H TOCSY | 0.75 mM VIR165, 0.75 mM FP1-23, 3%DMSO added | 90% H2O/10% D2O | 0 | 4.7 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 700 |
2 | Bruker | DRX | 500 |
3 | Bruker | DPX | 250 |
NMR Refinement | ||
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Method | Details | Software |
molecular dynamics | SYBYL |
NMR Ensemble Information | |
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Conformer Selection Criteria | all calculated structures submitted |
Conformers Calculated Total Number | 1 |
Conformers Submitted Total Number | 1 |
Representative Model | 1 (minimized average structure) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | SYBYL | Tripos |