☰ Navigation Tabs
Universal Stress Protein Rv2623 from Mycobaterium Tuberculosis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.6 0.2M CACL2 0.1M NAACT PH4.6 20% ISOPROPANOL
Crystal Properties Matthews coefficient Solvent content 3.5 64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 102.134 α = 90 b = 102.134 β = 90 c = 158.068 γ = 120
Symmetry Space Group P 64 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH MIRRORS 2005-09-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 MPG/DESY, HAMBURG BW6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.22 20 99.2 0.13 23 11.6 8342
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.22 3.32 98.7 0.34 6 11.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 3.22 88.39 7953 388 99.3 0.27 0.268 0.2768 0.324 0.3214 RANDOM 63
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.17 -0.08 -0.17 0.25
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 21.91 r_scangle_it 17.527 r_dihedral_angle_3_deg 13.768 r_scbond_it 12.206 r_dihedral_angle_4_deg 12.141 r_mcangle_it 7.601 r_dihedral_angle_1_deg 6.48 r_mcbond_it 4.761 r_angle_other_deg 3.716 r_angle_refined_deg 1.792
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 21.91 r_scangle_it 17.527 r_dihedral_angle_3_deg 13.768 r_scbond_it 12.206 r_dihedral_angle_4_deg 12.141 r_mcangle_it 7.601 r_dihedral_angle_1_deg 6.48 r_mcbond_it 4.761 r_angle_other_deg 3.716 r_angle_refined_deg 1.792 r_symmetry_vdw_refined 1.067 r_metal_ion_refined 0.573 r_symmetry_vdw_other 0.346 r_symmetry_hbond_refined 0.309 r_nbd_refined 0.289 r_nbd_other 0.278 r_xyhbond_nbd_refined 0.25 r_nbtor_refined 0.194 r_chiral_restr 0.119 r_nbtor_other 0.113 r_xyhbond_nbd_other 0.036 r_bond_refined_d 0.012 r_gen_planes_other 0.008 r_gen_planes_refined 0.005 r_bond_other_d r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1944 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 64
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling SHARP phasing