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alpha-glucan recognition by a family 41 carbohydrate-binding module from Thermotoga maritima pullulanase PulA
Crystallization Crystal Properties Matthews coefficient Solvent content 3.56 65.18
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 112.504 α = 90 b = 112.504 β = 90 c = 83.739 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113 IMAGE PLATE RIGAKU IMAGE PLATE M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.69 19.81 99.4 0.04 14.6 6.84 22721 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.69 1.75 100 0.38 2.8 5.52
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.69 63.25 21551 1161 99.2 0.207 0.205 0.2212 0.24 0.252 RANDOM 36.02
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.07 -1.53 -3.07 4.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 19.226 r_scangle_it 6.373 r_scbond_it 4.549 r_mcangle_it 2.781 r_mcbond_it 2.036 r_angle_refined_deg 1.976 r_angle_other_deg 0.93 r_symmetry_vdw_other 0.312 r_nbd_other 0.259 r_nbd_refined 0.241
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 19.226 r_scangle_it 6.373 r_scbond_it 4.549 r_mcangle_it 2.781 r_mcbond_it 2.036 r_angle_refined_deg 1.976 r_angle_other_deg 0.93 r_symmetry_vdw_other 0.312 r_nbd_other 0.259 r_nbd_refined 0.241 r_symmetry_vdw_refined 0.192 r_xyhbond_nbd_refined 0.182 r_symmetry_hbond_refined 0.135 r_chiral_restr 0.124 r_nbtor_other 0.087 r_bond_refined_d 0.023 r_gen_planes_refined 0.009 r_gen_planes_other 0.008 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 845 Nucleic Acid Atoms Solvent Atoms 144 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement