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ATYPICAL POLYPROLINE RECOGNITION BY THE CMS N-TERMINAL SH3 DOMAIN. CMS:CD2 HETEROTRIMER
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details other CMSA-CBL-B STRUCTURE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 20% PEG3000, 0.1M ACETATE PH 5.5
Crystal Properties Matthews coefficient Solvent content 2.34 47.42
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.391 α = 90 b = 66.391 β = 90 c = 68.736 γ = 90
Symmetry Space Group I 4 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD MARRESEARCH MIRRORS 2004-06-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.22 34.36 98 0.11 25.02 16.66 3933 33
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.22 2.26 86.6 0.41 15.74 14.22
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT CMSA-CBL-B STRUCTURE 2.23 47.73 3932 177 98.1 0.243 0.241 0.241 0.286 0.2713 RANDOM 24.85
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.21 -0.21 0.42
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.944 r_dihedral_angle_4_deg 17.052 r_dihedral_angle_3_deg 16.883 r_dihedral_angle_1_deg 5.75 r_scangle_it 3.007 r_mcangle_it 2.31 r_scbond_it 2.058 r_mcbond_it 1.482 r_angle_refined_deg 1.306 r_nbtor_refined 0.304
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.944 r_dihedral_angle_4_deg 17.052 r_dihedral_angle_3_deg 16.883 r_dihedral_angle_1_deg 5.75 r_scangle_it 3.007 r_mcangle_it 2.31 r_scbond_it 2.058 r_mcbond_it 1.482 r_angle_refined_deg 1.306 r_nbtor_refined 0.304 r_symmetry_vdw_refined 0.256 r_nbd_refined 0.201 r_symmetry_hbond_refined 0.196 r_xyhbond_nbd_refined 0.172 r_chiral_restr 0.077 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 534 Nucleic Acid Atoms Solvent Atoms 46 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction TRUNCATE data scaling AMoRE phasing