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P450 BM3 heme domain in complex with DMSO
Crystallization Crystal Properties Matthews coefficient Solvent content 2.6 52.64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.598 α = 90 b = 88.297 β = 90 c = 151.274 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2006-03-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X13 EMBL/DESY, HAMBURG X13
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.09 23.48 97.4 0.12 9.34 3.53 62273
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.09 2.11 83.7 0.45 2.04 3.21
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.1 21.78 62217 3151 99 0.193 0.19 0.1921 0.243 0.2446 RANDOM 27.74
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.075 -0.127 0.052
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.206 r_dihedral_angle_4_deg 17.832 r_dihedral_angle_3_deg 16.512 r_dihedral_angle_1_deg 6.381 r_scangle_it 3.595 r_scbond_it 2.364 r_angle_refined_deg 1.555 r_mcangle_it 1.412 r_mcbond_it 0.84 r_nbtor_refined 0.313
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.206 r_dihedral_angle_4_deg 17.832 r_dihedral_angle_3_deg 16.512 r_dihedral_angle_1_deg 6.381 r_scangle_it 3.595 r_scbond_it 2.364 r_angle_refined_deg 1.555 r_mcangle_it 1.412 r_mcbond_it 0.84 r_nbtor_refined 0.313 r_symmetry_vdw_refined 0.23 r_nbd_refined 0.218 r_symmetry_hbond_refined 0.183 r_xyhbond_nbd_refined 0.164 r_chiral_restr 0.104 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7283 Nucleic Acid Atoms Solvent Atoms 455 Heterogen Atoms 122
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction TRUNCATE data scaling PHASER phasing