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Ferrous Chloroperoxidase (high dose data set)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1CPO PDB ENTRY 1CPO
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 3.4 50MM KBR, 20% PEG3000, 0.1 SODIUM CITRATE PH 3.4
Crystal Properties Matthews coefficient Solvent content 2.6 52
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.73 α = 90 b = 150.46 β = 90 c = 100.75 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 CCD MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 20 95.3 0.14 10.8 4.4 190444 3 20.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.8 94.1 0.55 5.8 3.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1CPO 1.75 19.75 3 43278 2165 95.3 0.178 0.176 0.1746 0.204 0.2023 RANDOM 15.93
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.387 -1.245 0.858
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.614 r_dihedral_angle_4_deg 16.354 r_dihedral_angle_3_deg 11.657 r_dihedral_angle_1_deg 5.611 r_scangle_it 3.088 r_scbond_it 1.99 r_angle_refined_deg 1.408 r_mcangle_it 1.247 r_mcbond_it 0.742 r_nbtor_refined 0.315
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.614 r_dihedral_angle_4_deg 16.354 r_dihedral_angle_3_deg 11.657 r_dihedral_angle_1_deg 5.611 r_scangle_it 3.088 r_scbond_it 1.99 r_angle_refined_deg 1.408 r_mcangle_it 1.247 r_mcbond_it 0.742 r_nbtor_refined 0.315 r_nbd_refined 0.204 r_symmetry_vdw_refined 0.163 r_symmetry_hbond_refined 0.136 r_xyhbond_nbd_refined 0.129 r_chiral_restr 0.089 r_bond_refined_d 0.011 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2316 Nucleic Acid Atoms Solvent Atoms 338 Heterogen Atoms 249
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling