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Crystal structure of Acetamidase (10172637) from Bacillus Halodurans at 1.95 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 20.0% POLYETHYLENE GLYCOL 3350, 0.2M CALCIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 293K
Crystal Properties Matthews coefficient Solvent content 2.15 42.27
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.759 α = 73.95 b = 69.605 β = 88.91 c = 94.984 γ = 86.63
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2006-08-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.898 28.892 90.3 0.116 0.116 6.1 3.7 70889 18.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.95 2 89.3 0.681 0.681 1.1 3.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.95 28.89 70887 3594 90.2 0.17761 0.175 0.1785 0.228 0.23 RANDOM 13.08
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.88 1.22 -1.58 0.06 -0.71 -0.64
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.479 r_dihedral_angle_4_deg 13.732 r_dihedral_angle_3_deg 13.382 r_dihedral_angle_1_deg 6.487 r_scangle_it 6.406 r_scbond_it 4.87 r_mcangle_it 2.549 r_mcbond_it 1.887 r_angle_refined_deg 1.478 r_angle_other_deg 0.976
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.479 r_dihedral_angle_4_deg 13.732 r_dihedral_angle_3_deg 13.382 r_dihedral_angle_1_deg 6.487 r_scangle_it 6.406 r_scbond_it 4.87 r_mcangle_it 2.549 r_mcbond_it 1.887 r_angle_refined_deg 1.478 r_angle_other_deg 0.976 r_mcbond_other 0.47 r_symmetry_vdw_refined 0.289 r_metal_ion_refined 0.224 r_nbd_refined 0.217 r_symmetry_vdw_other 0.217 r_symmetry_hbond_refined 0.217 r_nbd_other 0.189 r_xyhbond_nbd_refined 0.177 r_nbtor_refined 0.165 r_chiral_restr 0.112 r_nbtor_other 0.084 r_symmetry_metal_ion_refined 0.07 r_bond_refined_d 0.014 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8747 Nucleic Acid Atoms Solvent Atoms 443 Heterogen Atoms 15
Software Software Software Name Purpose SHELXD phasing SHARP phasing REFMAC refinement MOSFLM data reduction CCP4 data scaling