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CRYSTAL STRUCTURE OF A PUTATIVE ATTH (NE1406) FROM NITROSOMONAS EUROPAEA AT 2.00 A RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP, NANODROP 9 293 1.4M ammonium sulfate, 0.1M CHES, pH 9.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.35 47.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.275 α = 90 b = 95.573 β = 90 c = 121.745 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD Adjustable focusing mirrors in K-B geometry 2006-08-11 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 0.97939,0.94926,0.97925 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 29.161 98.4 0.117 0.117 5.3 3.6 49800
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.05 95.9 0.599 0.599 1.3 3.5 3542
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2 29.161 49646 2528 97.97 0.184 0.182 0.1959 0.232 0.2403 RANDOM 25.666
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.98 -0.87 -0.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.461 r_dihedral_angle_4_deg 15.374 r_dihedral_angle_3_deg 13.549 r_dihedral_angle_1_deg 7.704 r_scangle_it 7.089 r_scbond_it 5.563 r_mcangle_it 3.228 r_mcbond_it 2.283 r_angle_refined_deg 1.647 r_angle_other_deg 0.846
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.461 r_dihedral_angle_4_deg 15.374 r_dihedral_angle_3_deg 13.549 r_dihedral_angle_1_deg 7.704 r_scangle_it 7.089 r_scbond_it 5.563 r_mcangle_it 3.228 r_mcbond_it 2.283 r_angle_refined_deg 1.647 r_angle_other_deg 0.846 r_mcbond_other 0.754 r_symmetry_vdw_other 0.221 r_nbd_other 0.203 r_nbtor_refined 0.185 r_nbd_refined 0.184 r_xyhbond_nbd_refined 0.155 r_symmetry_vdw_refined 0.117 r_chiral_restr 0.104 r_nbtor_other 0.088 r_symmetry_hbond_refined 0.085 r_bond_refined_d 0.018 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5086 Nucleic Acid Atoms Solvent Atoms 394 Heterogen Atoms 49
Software Software Software Name Purpose MolProbity model building REFMAC refinement SCALA data scaling PDB_EXTRACT data extraction MOSFLM data reduction CCP4 data scaling SOLVE phasing RESOLVE phasing