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Crystal Structure of a protease resistant fragment of the plakin domain of Bullous Pemphigoid Antigen1 (BPAG1)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 9.2 273 1.6M ammonium sulphate, 50mM CAPSO, pH 9.2, VAPOR DIFFUSION, HANGING DROP, temperature 273K
Crystal Properties Matthews coefficient Solvent content 5.89 79.11
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 195.8 α = 90 b = 195.8 β = 90 c = 195.8 γ = 90
Symmetry Space Group I 41 3 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD ADSC QUANTUM 315 2005-10-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A 0.9791 NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 20 99.6 24211 24299 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3 3.18 99.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 3 20 24211 12428 647 99.68 0.226 0.22819 0.2263 0.2349 0.26655 0.2767 RANDOM 41.221
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.889 r_dihedral_angle_3_deg 23.238 r_dihedral_angle_4_deg 16.057 r_dihedral_angle_1_deg 8.239 r_angle_refined_deg 1.89 r_nbtor_refined 0.324 r_nbd_refined 0.298 r_symmetry_vdw_refined 0.192 r_symmetry_hbond_refined 0.166 r_xyhbond_nbd_refined 0.156
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.889 r_dihedral_angle_3_deg 23.238 r_dihedral_angle_4_deg 16.057 r_dihedral_angle_1_deg 8.239 r_angle_refined_deg 1.89 r_nbtor_refined 0.324 r_nbd_refined 0.298 r_symmetry_vdw_refined 0.192 r_symmetry_hbond_refined 0.166 r_xyhbond_nbd_refined 0.156 r_chiral_restr 0.137 r_bond_refined_d 0.018 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_scbond_it r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1550 Nucleic Acid Atoms Solvent Atoms 11 Heterogen Atoms 10
Software Software Software Name Purpose REFMAC refinement CBASS data collection XDS data reduction XDS data scaling SHELXS phasing