2I50

Solution Structure of Ubp-M Znf-UBP domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1HNCA1mM U-15N,13C, 25 mM Sodium Phosphate, 100 mM KCl, 95% H2O, 5% D2O95% H2O/5% D2O100 mM KCl7.01 atm300
2HN(CO)CA1mM U-15N,13C, 25 mM Sodium Phosphate, 100 mM KCl, 95% H2O, 5% D2O95% H2O/5% D2O100 mM KCl7.01 atm300
3HN(CA)CB1mM U-15N,13C, 25 mM Sodium Phosphate, 100 mM KCl, 95% H2O, 5% D2O95% H2O/5% D2O100 mM KCl7.01 atm300
4HN(COCA)CB1mM U-15N,13C, 25 mM Sodium Phosphate, 100 mM KCl, 95% H2O, 5% D2O95% H2O/5% D2O100 mM KCl7.01 atm300
5HNCO1mM U-15N,13C, 25 mM Sodium Phosphate, 100 mM KCl, 95% H2O, 5% D2O95% H2O/5% D2O100 mM KCl7.01 atm300
6HN(CA)CO1mM U-15N,13C, 25 mM Sodium Phosphate, 100 mM KCl, 95% H2O, 5% D2O95% H2O/5% D2O100 mM KCl7.01 atm300
7HNHA1mM U-15N,13C, 25 mM Sodium Phosphate, 100 mM KCl, 95% H2O, 5% D2O95% H2O/5% D2O100 mM KCl7.01 atm300
8HCCH-TOCSY1mM U-15N, 13C, 25 mM Sodium Phosphate, 100 mM KCl100% D2O100 mM KCl7.01 atm300
93D_15N-separated_NOESY1mM U-15N, 25 mM Sodium Phosphate, 100 mM KCl, 95% H2O, 5% D2O95% H2O/5% D2O100 mM KCl7.01 atm300
103D_13C-separated_NOESY1mM U-15N, 13C, 25 mM Sodium Phosphate, 100 mM KCl100% D2O100 mM KCl7.01 atm300
112D NOESYUnlabeled, 25 mM Sodium Phosphate, 100 mM KCl100% D2O100 mM KCl7.01 atm300
122D TOCSYUnlabeled, 25 mM Sodium Phosphate, 100 mM KCl100% D2O100 mM KCl7.01 atm300
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, molecular dynamicsInitial structure was calcultated using torsion angle dynamics by CYANA, followed the water refinment with XPLOR-NIHNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with favorable non-bond energy
Conformers Calculated Total Number40
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.3Delaglio, F.
2data analysisCARA/XEASY1.5.1Keller, R.
3structure solutionCYANA2.1Guntert, P.
4refinementXPLOR-NIH2.9.7Schwieters, C.D.