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Crystal structure of aromatic amine dehydrogenase TTQ-phenylacetaldehyde adduct
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 295 PEG2000 MME, Ammonium Sulphate, Sodium Cocadylate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.34 47.41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.619 α = 90 b = 88.821 β = 90.56 c = 79.942 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD ADSC QUANTUM 315 2006-07-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.9 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 44.412 99.5 0.086 0.086 4.8 3.5 192803
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.4 1.48 99.1 0.321 0.321 2.2 3.5 27965
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.4 15 192688 192688 9711 99.59 0.147 0.145 0.1463 0.169 0.1683 RANDOM 10.592
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.54 -0.31 0.26 0.28
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.691 r_dihedral_angle_4_deg 11.713 r_dihedral_angle_3_deg 11.271 r_dihedral_angle_1_deg 7.035 r_scangle_it 2.69 r_scbond_it 1.978 r_angle_refined_deg 1.408 r_mcangle_it 1.224 r_mcbond_it 0.89 r_angle_other_deg 0.81
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.691 r_dihedral_angle_4_deg 11.713 r_dihedral_angle_3_deg 11.271 r_dihedral_angle_1_deg 7.035 r_scangle_it 2.69 r_scbond_it 1.978 r_angle_refined_deg 1.408 r_mcangle_it 1.224 r_mcbond_it 0.89 r_angle_other_deg 0.81 r_mcbond_other 0.214 r_symmetry_vdw_other 0.213 r_nbd_refined 0.207 r_symmetry_vdw_refined 0.205 r_nbd_other 0.195 r_nbtor_refined 0.18 r_xyhbond_nbd_refined 0.136 r_symmetry_hbond_refined 0.136 r_nbtor_other 0.097 r_chiral_restr 0.088 r_bond_refined_d 0.013 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7478 Nucleic Acid Atoms Solvent Atoms 1743 Heterogen Atoms 18
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction MOSFLM data reduction CCP4 data scaling