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Human Annexin A2 with heparin tetrasaccharide bound
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1XJL PDB Entry: 1XJL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 5 290 1,6 hexanediol, pH 5.0, hanging drop, temperature 290K
Crystal Properties Matthews coefficient Solvent content 2.86 56.92
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 107.934 α = 90 b = 54.301 β = 90 c = 68.896 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2005-03-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X8C 0.97930 NSLS X8C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.86 50 92.6 0.075 12.6 32153
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.86 1.93 94.8 0.349 3223
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB Entry: 1XJL 1.86 50 30496 2455 87.7 0.199 0.1951 0.233 0.2254 20.728
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -5.231 2.704 2.527
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 3.535 c_scbond_it 2.311 c_mcangle_it 1.876 c_mcbond_it 1.22 c_angle_deg 0.99287 c_bond_d 0.004671
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2478 Nucleic Acid Atoms Solvent Atoms 432 Heterogen Atoms 75
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling EPMR phasing CNS refinement PDB_EXTRACT data extraction