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Crystal Structure of Conserved Protein of Unknown Function from Enterococcus faecalis V583 at 2.4 A Resolution, Probable N-Acyltransferase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6 298 pH 6.0, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.7 54.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 189.626 α = 90 b = 104.277 β = 98.26 c = 152.281 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2006-03-01 M SINGLE WAVELENGTH 2 1 100
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 0.97929 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 50 97.5 0.095 9.43 4 112275 112275
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.49 87.4 0.48 1.23 1.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.4 20 106381 106381 5613 97.91 0.18751 0.18751 0.18504 0.23347 0.2618 RANDOM 33.891
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.53 2.45 -1.97 1.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.697 r_dihedral_angle_4_deg 20.204 r_dihedral_angle_3_deg 17.784 r_dihedral_angle_1_deg 6.955 r_scangle_it 2.79 r_scbond_it 1.933 r_angle_refined_deg 1.404 r_mcangle_it 1.079 r_mcbond_it 1.058 r_angle_other_deg 0.864
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.697 r_dihedral_angle_4_deg 20.204 r_dihedral_angle_3_deg 17.784 r_dihedral_angle_1_deg 6.955 r_scangle_it 2.79 r_scbond_it 1.933 r_angle_refined_deg 1.404 r_mcangle_it 1.079 r_mcbond_it 1.058 r_angle_other_deg 0.864 r_symmetry_vdw_other 0.262 r_symmetry_vdw_refined 0.261 r_nbd_refined 0.205 r_nbd_other 0.199 r_nbtor_refined 0.199 r_symmetry_hbond_refined 0.197 r_mcbond_other 0.153 r_xyhbond_nbd_refined 0.143 r_nbtor_other 0.087 r_chiral_restr 0.069 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 18993 Nucleic Acid Atoms Solvent Atoms 541 Heterogen Atoms 153
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling SOLVE phasing