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CRYSTAL STRUCTURE OF A FLAVIN-NUCLEOTIDE-BINDING PROTEIN (BH_0577) FROM BACILLUS HALODURANS AT 2.50 A RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 293 22.0% PEG-3350, 0.15M NaThioCyanate, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 3.43 63.88
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.17 α = 90 b = 72.17 β = 90 c = 129.981 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD Flat collimating mirror, toroid focusing mirror 2006-06-05 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 0.92522,0.97934 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 28.831 99.7 0.098 0.098 5.2 13.6 7389
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.42 2.48 99.7 0.015 0.01507 0.5 14.4 586
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.5 28.831 7389 346 99.42 0.21 0.208 0.2181 0.262 0.2745 RANDOM 57.979
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.55 0.78 1.55 -2.33
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.433 r_dihedral_angle_3_deg 14.91 r_dihedral_angle_4_deg 12.38 r_dihedral_angle_1_deg 8.53 r_scangle_it 7.111 r_scbond_it 4.713 r_mcangle_it 3.345 r_mcbond_it 1.741 r_angle_refined_deg 1.547 r_angle_other_deg 0.675
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.433 r_dihedral_angle_3_deg 14.91 r_dihedral_angle_4_deg 12.38 r_dihedral_angle_1_deg 8.53 r_scangle_it 7.111 r_scbond_it 4.713 r_mcangle_it 3.345 r_mcbond_it 1.741 r_angle_refined_deg 1.547 r_angle_other_deg 0.675 r_mcbond_other 0.237 r_nbd_refined 0.225 r_nbd_other 0.217 r_xyhbond_nbd_refined 0.207 r_nbtor_refined 0.205 r_symmetry_vdw_other 0.183 r_symmetry_vdw_refined 0.155 r_symmetry_hbond_refined 0.152 r_nbtor_other 0.093 r_chiral_restr 0.076 r_bond_refined_d 0.012 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 943 Nucleic Acid Atoms Solvent Atoms 20 Heterogen Atoms 54
Software Software Software Name Purpose MolProbity model building SHELX phasing REFMAC refinement SCALA data scaling PDB_EXTRACT data extraction MOSFLM data reduction CCP4 data scaling SOLVE phasing