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Crystal structure of the CAP-Gly domain of human Dynactin-1 (p150-Glued)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.5 298 25% PEG 3350, 0.05M sodium citrate, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.93 36.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.3 α = 90 b = 55.2 β = 90 c = 66.6 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH Osmic mirrors 2005-04-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.86 42.49 98.3 25448 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.86 2 95
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.87 42.49 13030 13030 684 99.21 0.20182 0.19932 0.2021 0.25056 0.2445 RANDOM 27.04
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.48 -0.29 -0.2
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.357 r_dihedral_angle_4_deg 14.916 r_dihedral_angle_3_deg 14.337 r_scangle_it 7.373 r_dihedral_angle_1_deg 5.654 r_scbond_it 4.704 r_mcangle_it 2.847 r_mcbond_it 1.967 r_angle_refined_deg 1.198 r_symmetry_hbond_refined 0.404
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.357 r_dihedral_angle_4_deg 14.916 r_dihedral_angle_3_deg 14.337 r_scangle_it 7.373 r_dihedral_angle_1_deg 5.654 r_scbond_it 4.704 r_mcangle_it 2.847 r_mcbond_it 1.967 r_angle_refined_deg 1.198 r_symmetry_hbond_refined 0.404 r_symmetry_vdw_refined 0.334 r_nbtor_refined 0.308 r_nbd_refined 0.2 r_xyhbond_nbd_refined 0.167 r_chiral_restr 0.076 r_bond_refined_d 0.011 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1132 Nucleic Acid Atoms Solvent Atoms 60 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling MOLREP phasing