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Crystal structure of BH3980 (10176605) from BACILLUS HALODURANS at 2.04 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION,SITTING DROP,NANODROP 8.5 277 2.0M (NH4)2SO4, 0.1M TRIS pH 8.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 5.26 76.43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 93.54 α = 90 b = 93.54 β = 90 c = 115.32 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 1m long Rh coated bent cylindrical mirror forhorizontal and vertical focussing 2006-05-26 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC Q315 Flat mirror (vertical focusing) 2006-04-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL1-5 0.979075 SSRL BL1-5 2 SYNCHROTRON SSRL BEAMLINE BL11-1 0.979075 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.04 46.984 98.1 0.098 12.24 19622 40.266
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.04 2.11 95.3 0.893 2.2 3296
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.04 46.984 19577 999 99.98 0.225 0.22491 0.224 0.2323 0.238 0.25 RANDOM 30.351
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.297 r_dihedral_angle_4_deg 20.7 r_dihedral_angle_3_deg 14.017 r_scangle_it 6.446 r_scbond_it 5.071 r_dihedral_angle_1_deg 4.79 r_mcangle_it 2.763 r_mcbond_it 2.126 r_angle_refined_deg 1.053 r_angle_other_deg 0.72
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.297 r_dihedral_angle_4_deg 20.7 r_dihedral_angle_3_deg 14.017 r_scangle_it 6.446 r_scbond_it 5.071 r_dihedral_angle_1_deg 4.79 r_mcangle_it 2.763 r_mcbond_it 2.126 r_angle_refined_deg 1.053 r_angle_other_deg 0.72 r_mcbond_other 0.416 r_symmetry_vdw_refined 0.35 r_nbd_refined 0.21 r_xyhbond_nbd_refined 0.209 r_symmetry_vdw_other 0.2 r_nbtor_refined 0.189 r_nbd_other 0.17 r_nbtor_other 0.087 r_symmetry_hbond_refined 0.07 r_chiral_restr 0.063 r_bond_refined_d 0.016 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 888 Nucleic Acid Atoms Solvent Atoms 78 Heterogen Atoms
Software Software Software Name Purpose MolProbity model building REFMAC refinement XSCALE data scaling PDB_EXTRACT data extraction