2HG6

Solution NMR Structure of Protein PA1123 from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium Target PaT4; Ontario Centre for Structural Proteomics Target PA1123.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D N15/13C time shared NOESY1mM Protein, U-15N,13C; 10 mM Phosphate Buffer;400mM NaCl;10mM DTT; 0.01% NaN3; 1mM Benzamidine; 1X protease; inhibitor cocktail; 95% H2O+5% D2O95% H2O/5% D2O400 mM NaCl, 10 mM Phosphate6.5ambient300
23D_13C-separated_NOESYPhosphate Buffer;400mM NaCl;10mM DTT; 0.01% NaN3; 1mM Benzamidine; 1X protease inhibitor cocktail; 100% D2O100% D2O400 mM NaCl, 10 mM Phosphate6.5ambient300
34D_13C-separated_NOESYPhosphate Buffer;400mM NaCl;10mM DTT; 0.01% NaN3; 1mM Benzamidine; 1X protease inhibitor cocktail; 100% D2O100% D2O400 mM NaCl, 10 mM Phosphate6.5ambient300
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealing1887 NOE distance constraints 22 Hydrogen bond constraints 122 Angle restraintsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (fewest violations,lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.3Delaglio, F. etal
2data analysisSparky3.106Goddar, T.D. and Kneller, D.G. UCSF
3structure solutionCYANA2.1Gunter, P.
4refinementCNS1.1Brunger, A.T. etal